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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009366.1_644_892_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

644 - 892

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGGCACGGGCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

TGCTGCTCTACG

Flanking Amino Acid:

FEALGIAQPKTLLARAVAHH

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

63.7

0.34

1.6

39.9

Major PPT

44.5

-0.3

1.2

33.4

40.6

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

44.3

-0.6

2.3

52.54

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020340

Chromosome:

PEDO01009366.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040286

4 - 1351

1348