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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009366.1_994_1186_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

994 - 1186

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCAGGGCAA

5'SS Class:

weak_major

3'SS Sequence:

GATGGCCCGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTGTTTGTGATG

Flanking Amino Acid:

VQKFIGEGKLVTLPPSSSWT

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.4

48.6

40.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

43.3

-0.3

1.7

39.9

40.1

Minor 5ss

20.3

-3.4

4.1

43.6

Minor BPS

44.4

-0.5

48.17

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020340

Chromosome:

PEDO01009366.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040286

4 - 1351

1348