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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009371.1_25295_25507_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25295 - 25507

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGGGGGTGTCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TGTTTTTTTTTT

Flanking Amino Acid:

LLEVLSGEQLPKPTRGRMRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

72.9

31.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

0.16

1.2

53.8

49.8

Minor 5ss

28.5

-2.5

2.8

31.7

36.2

Minor BPS

41.4

-0.5

3.5

71.36

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020475

Chromosome:

PEDO01009371.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042729

20503 - 30408

9906