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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009371.1_25857_25940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25857 - 25940

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTACCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

CCCTTTCTACCT

Flanking Amino Acid:

LLLWCQMKTAGYPEVNIQNF

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

84.2

0.77

0.7

78.4

29.1

Minor 5ss

28.5

-2.5

3.1

31.8

42.6

Minor BPS

45.2

-0.2

1.9

58.74

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020475

Chromosome:

PEDO01009371.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042729

20503 - 30408

9906