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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009371.1_27868_27948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27868 - 27948

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGGTG

5'SS Class:

major

3'SS Sequence:

CCCCCCCTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCGAC

U12 Branch Point Sequence:

CTGTTGCGACCT

Flanking Amino Acid:

EGKSISDINKAWSCLEKAEH

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.1

56.9

42.1

Major BPS

49.5

-0

1.4

49.9

45.3

Major PPT

66.6

0.37

0.7

60.7

21.8

Minor 5ss

26.4

-2.7

3.7

37.4

47.3

Minor BPS

37.2

-0.8

2.4

56.37

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020475

Chromosome:

PEDO01009371.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042729

20503 - 30408

9906