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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009383.1_2378_2561_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2378 - 2561

Intron Length:

184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

TGGGTCTGGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCGCAC

U12 Branch Point Sequence:

TTAGCTGGAGCT

Flanking Amino Acid:

VDDAFEELQVAAPHKIPLSV

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

45.2

Major BPS

60.1

0.25

1.4

71.3

36.7

Major PPT

44.5

-0.3

1.8

46.3

45.8

Minor 5ss

24.8

-2.9

3.1

21.9

37.8

Minor BPS

42.8

-0.4

2.3

65.33

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017187

Chromosome:

PEDO01009383.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021775

1966 - 2593

628