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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009388.1_1564_1907_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1564 - 1907

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGCT

5'SS Class:

major

3'SS Sequence:

ATGTTATCACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCATTATG

Flanking Amino Acid:

TKQLRQLLEKVFERMSLNKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

70.5

38.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

56.9

0.16

1.2

55.4

43.5

Minor 5ss

37.4

-1.4

3.6

56.7

47.6

Minor BPS

59.4

0.15

72.64

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019806

Chromosome:

PEDO01009388.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046654

737 - 2443

1707