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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009393.1_369_3561_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

369 - 3561

Intron Length:

3193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGGCC

5'SS Class:

major

3'SS Sequence:

GGAAGCAGAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

ACAGCCACACCT

Flanking Amino Acid:

TDSRKKDTCKGDSAQQPQGP

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.2

60.6

40.1

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

42.2

-0.4

1.1

28.2

35.4

Minor 5ss

-1.7

3.7

45.8

Minor BPS

41.7

-0.5

56.36

45.6

Associated Gene:

Gene:

CFD

Ensembl Gene ID:

ENSAPLG00000023562

Chromosome:

PEDO01009393.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034313

21 - 5115

5095