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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009393.1_517_4757_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

517 - 4757

Intron Length:

4241

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCGCGTTCT

5'SS Class:

weak_major

3'SS Sequence:

GGGGATGCCCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAACCAC

U12 Branch Point Sequence:

GAGCCCAGAACC

Flanking Amino Acid:

EEDASQLFLRFVPGPLPGMP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.8

0.09

1.3

40.9

Major BPS

45.7

-0.2

1.1

50.5

33.7

Major PPT

51.1

0.03

1.1

44.4

Minor 5ss

27.3

-2.6

37.3

41.3

Minor BPS

47.9

-0.1

1.8

56.59

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018038

Chromosome:

PEDO01009393.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042245

40 - 5027

4988