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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009401.1_948_1052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

948 - 1052

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACGC

5'SS Class:

major

3'SS Sequence:

CTCTGCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CCCTCCCCAGGG

Flanking Amino Acid:

RCNVFKSKKKSQAMRVVRTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

60.8

44.4

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

0.49

0.8

65.4

30.5

Minor 5ss

30.9

-2.2

3.3

42.1

44.7

Minor BPS

36.2

-1.1

2.1

35.6

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014990

Chromosome:

PEDO01009401.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015612

21 - 1781

1761