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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009420.1_3812_4201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

3812 - 4201

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

CTCTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TATCCCCTAACG

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

35.1

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

81.2

0.7

0.8

75.8

32.7

Minor 5ss

36.1

-1.6

2.8

42.3

38.4

Minor BPS

64.8

0.33

1.8

71.55

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028811

Chromosome:

PEDO01009420.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019573

2943 - 5887

2945