Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009441.1_823_921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

823 - 921

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGGCCG

5'SS Class:

major

3'SS Sequence:

CTCGGTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCAGAC

U12 Branch Point Sequence:

GACACCAGACCC

Flanking Amino Acid:

AKTKLGRVPSCLPREPCAVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

50.9

45.4

Major BPS

47.2

-0.1

40.3

Major PPT

72.7

0.51

0.9

65.3

36.3

Minor 5ss

37.6

-1.4

3.2

48.9

46.8

Minor BPS

41.3

-0.6

1.9

47.37

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030529

Chromosome:

PEDO01009441.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039661

170 - 1029

860