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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009467.1_378_489_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

378 - 489

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCC

5'SS Class:

major

3'SS Sequence:

CTGCTTCCAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GCGCCCTCACCG

Flanking Amino Acid:

ALVPPPAAPQEEEEVPRKKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.7

36.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

49.5

-0

1.7

Minor 5ss

29.4

-2.4

3.6

41.9

45.1

Minor BPS

45.2

-0.5

1.9

45.76

46.3

Associated Gene:

Gene:

MRPL12

Ensembl Gene ID:

ENSAPLG00000017909

Chromosome:

PEDO01009467.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019604

52 - 3240

3189