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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009476.1_40259_40334_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
40259 - 40334

Intron Length:
76

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGGGCG

5'SS Class:
major

3'SS Sequence:
TGTGGCACCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAC

U12 Branch Point Sequence:
TCCTCGCTGACA

Flanking Amino Acid:
GRYCGETVRGRMEGRGSYTL

Intron Amino Acid Position:
16

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.6
0.56
1
58
38.5

Major BPS
53.9
0.1
1.2
46.4
38.9

Major PPT
63.4
0.3
1
54.8
40.3

Minor 5ss
22.7
-3.1
3.4
28.9
43.8

Minor BPS
47.1
-0.2
2.4
62.83
43.7

Associated Gene:

Gene:
MORN5

Ensembl Gene ID:

Chromosome:
PEDO01009476.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

40212 - 53475
13264