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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009476.1_40483_40603_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
40483 - 40603

Intron Length:
121

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACCGCGA

5'SS Class:
major

3'SS Sequence:
CTTGTGTTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCCCAG

U12 Branch Point Sequence:
CCTCCCGTGCCC

Flanking Amino Acid:
AVWHRGVPAEGKYTFADGLE

Intron Amino Acid Position:
66

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64
0.33
1.3
51.6
46.8

Major BPS
39.5
-0.6
1.5
43.7
39.4

Major PPT
72.6
0.51
1.1
68.6
42

Minor 5ss
34.6
-1.8
3.5
48
47.4

Minor BPS
36
-1.1
3.7
54.6
44.1

Associated Gene:

Gene:
MORN5

Ensembl Gene ID:

Chromosome:
PEDO01009476.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

40212 - 53475
13264