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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009476.1_41630_53359_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
41630 - 53359

Intron Length:
11730

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGATTG

5'SS Class:
strong_major

3'SS Sequence:
CTCTCCATTTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTCCAT

U12 Branch Point Sequence:
TTTCTCTCCATT

Flanking Amino Acid:
DYKMRFLRNADDDEHEWIIR

Intron Amino Acid Position:
147

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.79
0.9
74.2
37.1

Major BPS
64.7
0.37
1.3
74.7
40

Major PPT
76.4
0.59
0.8
74
29.5

Minor 5ss
47.6
-0.2
2.8
64.3
47.2

Minor BPS
51.5
0.13
2
77.15
39.7

Associated Gene:

Gene:
MORN5

Ensembl Gene ID:

Chromosome:
PEDO01009476.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

40212 - 53475
13264