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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009490.1_167_1501_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

167 - 1501

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGTGGAAG

5'SS Class:

weak_major

3'SS Sequence:

CCACCACCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAC

U12 Branch Point Sequence:

TCCCTTCCACCC

Flanking Amino Acid:

QARGAANQVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.1

52.4

40.1

Major BPS

55.1

0.13

1.3

67.8

38.2

Major PPT

0.27

0.9

53.7

29.6

Minor 5ss

34.4

-1.8

3.1

44.2

44.6

Minor BPS

38.1

-0.9

1.8

43.52

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025314

Chromosome:

PEDO01009490.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048040

165 - 4599

4435