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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009490.1_4043_4576_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4043 - 4576

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCATGGTG

5'SS Class:

weak_major

3'SS Sequence:

TTCTCTGTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

TGACAGAGAAAG

Flanking Amino Acid:

EQCLTHGASLALVAPLIDEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.3

60.1

41.8

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

70.1

0.45

65.3

41.1

Minor 5ss

18.1

-3.7

26.1

Minor BPS

32.1

-1.4

2.1

35.59

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025314

Chromosome:

PEDO01009490.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018093

3543 - 4609

1067