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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009493.1_1204_5139_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1204 - 5139

Intron Length:

3936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

GGCTGTGTGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACCAAT

U12 Branch Point Sequence:

CCTGTAGGAACC

Flanking Amino Acid:

CSNPISVPLRRACWLSQSLV

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.9

0.28

1.1

56.1

41.4

Major BPS

55.3

0.13

1.2

62.7

32.2

Major PPT

58.7

0.2

1.2

52.4

Minor 5ss

41.1

-1

3.1

54.2

38.1

Minor BPS

38.6

-0.8

2.2

47.09

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017280

Chromosome:

PEDO01009493.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033495

345 - 5252

4908