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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009508.1_522_829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

522 - 829

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

TCTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTGCAC

U12 Branch Point Sequence:

TGCACGGGCACT

Flanking Amino Acid:

ALKDQDLMRAKMDNGEACFI

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

40.1

Major BPS

-0.4

1.5

48.8

46.3

Major PPT

85.2

0.79

0.8

79.9

32.1

Minor 5ss

-1.6

2.9

43.3

38.2

Minor BPS

33.8

-1.1

2.7

53.88

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026153

Chromosome:

PEDO01009508.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026561

32 - 3475

3444