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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009536.1_3510_3906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3510 - 3906

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

CTTCTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

CTGTGCTTACCC

Flanking Amino Acid:

NPHPEFLQLYKKVLPASTVS

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

61.5

43.4

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

80.8

0.69

0.7

73.2

31.7

Minor 5ss

32.8

-2

3.3

42.2

38.9

Minor BPS

52.5

0.06

2.1

65.47

46.4

Associated Gene:

Gene:

MEST

Ensembl Gene ID:

ENSAPLG00000007475

Chromosome:

PEDO01009536.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040967

2669 - 6501

3833

ENSAPLT00000035492

3392 - 6303

2912

ENSAPLT00000007762

3392 - 6303

2912