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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009536.1_3971_4279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3971 - 4279

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

CGTTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

CGGACAATAAAA

Flanking Amino Acid:

VGALKATSVPLHLIYGPLDP

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

46.2

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

86.1

0.81

0.8

80.6

31.4

Minor 5ss

31.5

-2.1

2.7

39.9

Minor BPS

42.4

-0.5

1.9

48.76

40.8

Associated Gene:

Gene:

MEST

Ensembl Gene ID:

ENSAPLG00000007475

Chromosome:

PEDO01009536.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035492

3392 - 6303

2912

ENSAPLT00000007762

3392 - 6303

2912

ENSAPLT00000040967

2669 - 6501

3833