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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009536.1_5020_5410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5020 - 5410

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GGACCCTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTAAT

U12 Branch Point Sequence:

GTTCCCCGGACC

Flanking Amino Acid:

RLMNFFFFSRGLGAVFGPYT

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.8

38.1

Major BPS

0.55

1.2

73.3

39.1

Major PPT

67.5

0.4

0.9

62.3

39.5

Minor 5ss

37.9

-1.4

2.9

40.9

45.3

Minor BPS

49.6

-0

1.9

66.48

38.4

Associated Gene:

Gene:

MEST

Ensembl Gene ID:

ENSAPLG00000007475

Chromosome:

PEDO01009536.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035492

3392 - 6303

2912

ENSAPLT00000007762

3392 - 6303

2912

ENSAPLT00000040967

2669 - 6501

3833