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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009536.1_5482_5564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5482 - 5564

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CAATGCTGAGCG

Flanking Amino Acid:

ETHRPRLIQKVLKDGGLLAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

65.5

0.35

0.9

56.3

33.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

43.2

-0.6

2.1

46.46

45.7

Associated Gene:

Gene:

MEST

Ensembl Gene ID:

ENSAPLG00000007475

Chromosome:

PEDO01009536.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040967

2669 - 6501

3833