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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009536.1_5529_5802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5529 - 5802

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTCG

5'SS Class:

strong_major

3'SS Sequence:

TTTAGGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

AATGCTTTTAGG

Flanking Amino Acid:

LIKSLCLSNGGFAPLANAER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

39.3

Major BPS

0.1

59.7

32.6

Major PPT

69.8

0.45

65.9

45.2

Minor 5ss

38.7

-1.3

2.9

47.6

Minor BPS

45.4

-0.5

50.1

44.3

Associated Gene:

Gene:

MEST

Ensembl Gene ID:

ENSAPLG00000007475

Chromosome:

PEDO01009536.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035492

3392 - 6303

2912

ENSAPLT00000007762

3392 - 6303

2912