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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009536.1_6236_6273_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6236 - 6273

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTTTTTGA

5'SS Class:

weak_major

3'SS Sequence:

CTCTGCTCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTTTTTTGAAGC

Flanking Amino Acid:

HWGLCFGGFGRPHRYSIFEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.3

52.5

40.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

69.3

0.43

65.1

36.3

Minor 5ss

41.6

-0.9

2.4

42.2

44.4

Minor BPS

54.8

0.13

1.7

67.24

38.5

Associated Gene:

Gene:

MEST

Ensembl Gene ID:

ENSAPLG00000007475

Chromosome:

PEDO01009536.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007762

3392 - 6303

2912