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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009545.1_2389_3551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2389 - 3551

Intron Length:

1163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTCAT

5'SS Class:

major

3'SS Sequence:

CCCTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CTCTTCTGACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

42.1

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

81.1

0.7

72.4

32.3

Minor 5ss

30.9

-2.2

3.1

41.2

45.2

Minor BPS

49.9

0.07

1.8

67.49

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018761

Chromosome:

PEDO01009545.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046361

21 - 3699

3679