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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009564.1_32636_34339_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32636 - 34339

Intron Length:

1704

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTCCGGTA

5'SS Class:

major

3'SS Sequence:

CCTCCTGCAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CACTGCTGACCC

Flanking Amino Acid:

ITDIAAELGQGAGDLVTADD

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.4

59.5

42.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

47.9

-0.1

1.7

54.2

35.2

Minor 5ss

23.3

-3.1

4.3

38.4

46.6

Minor BPS

-0.4

2.1

51.81

45.3

Associated Gene:

Gene:

WDR54

Ensembl Gene ID:

ENSAPLG00000007631

Chromosome:

PEDO01009564.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025004

30939 - 35400

4462

ENSAPLT00000021518

30939 - 35400

4462

ENSAPLT00000007907

30939 - 35400

4462