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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009564.1_38278_38465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38278 - 38465

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCGGCGCTCACG

Flanking Amino Acid:

LCLPRLQALTEQYAVDELLR

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

70.2

0.46

0.8

61.1

35.1

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

34.4

-1.3

2.5

34.63

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018678

Chromosome:

PEDO01009564.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018885

37697 - 42081

4385

ENSAPLT00000036411

37722 - 42081

4360