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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009596.1_348_1352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

348 - 1352

Intron Length:

1005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGGTGGG

5'SS Class:

major

3'SS Sequence:

TTTTCATATCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTCATATCC

Flanking Amino Acid:

MSPDAQESLEVAIQCLETAF

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.4

58.8

42.9

Major BPS

100

1.24

0.5

100

Major PPT

82.2

0.72

0.9

74.7

39.3

Minor 5ss

26.1

-2.7

3.1

31.9

42.5

Minor BPS

54.9

0.13

1.9

70.61

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030331

Chromosome:

PEDO01009596.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043332

164 - 2182

2019