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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009606.1_1116_1757_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1116 - 1757

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCCAGAGGA

5'SS Class:

major

3'SS Sequence:

GGCTGGGCTGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

ACGTGCCCATGG

Flanking Amino Acid:

PAGFWSLFSEAPQNHSPSGH

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.3

60.1

41.1

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

59.3

0.21

1.1

49.8

43.9

Minor 5ss

14.4

-4.1

3.4

12.8

27.9

Minor BPS

30.5

-1.6

2.2

30.04

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025873

Chromosome:

PEDO01009606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038528

53 - 2020

1968