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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009619.1_3516_4387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3516 - 4387

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGCA

5'SS Class:

strong_major

3'SS Sequence:

AATTTTATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCGGCCTTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.2

34.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

76.8

0.6

0.9

71.5

38.5

Minor 5ss

31.9

-2.1

3.3

41.7

44.9

Minor BPS

73.2

0.71

1.4

73.81

43.4

Associated Gene:

Gene:

AKAP8

Ensembl Gene ID:

ENSAPLG00000007188

Chromosome:

PEDO01009619.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040928

2965 - 18142

15178

ENSAPLT00000007488

2965 - 18142

15178