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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009619.1_4484_5069_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4484 - 5069

Intron Length:
586

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGAAGC

5'SS Class:
major

3'SS Sequence:
CCCTTTCTGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAT

U12 Branch Point Sequence:
TAATGCTGAATT

Flanking Amino Acid:
PRTDIAKGAPGYEGYDYYNT

Intron Amino Acid Position:
32

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76
0.61
1.3
69.9
41.1

Major BPS
79.4
0.73
0.9
79.6
29.1

Major PPT
74.1
0.54
0.9
68.2
37.5

Minor 5ss
29.2
-2.4
2.7
35.6
40.5

Minor BPS
57.4
0.31
1.9
75.2
41.3

Associated Gene:

Gene:
AKAP8

Ensembl Gene ID:

Chromosome:
PEDO01009619.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2965 - 18142
15178

2965 - 18142
15178