Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009623.1_751_2237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

751 - 2237

Intron Length:

1487

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCTGGTGTC

5'SS Class:

major

3'SS Sequence:

TTCCCATCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

GAATCCCTGACG

Flanking Amino Acid:

YRSVMRGSYEINILSCQATQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

74.5

35.6

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

76.1

0.59

0.8

73.5

30.2

Minor 5ss

24.3

-3

4.2

39.4

Minor BPS

54.2

-0

1.8

58.43

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027420

Chromosome:

PEDO01009623.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043537

627 - 2347

1721