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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_104158_104241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104158 - 104241

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

CCCCCCTGACCC

Flanking Amino Acid:

NIQYGDSARQDDARKLLHLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

67.1

0.38

0.9

61.5

34.9

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

46.9

-0.2

1.8

52.11

45.1

Associated Gene:

Gene:

GNAT1

Ensembl Gene ID:

ENSAPLG00000004306

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010215

103151 - 105452

2302