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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_104624_104738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

104624 - 104738

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGTT

5'SS Class:

strong_major

3'SS Sequence:

TGGTCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GTGTGCTGAGCC

Flanking Amino Acid:

TQFSFKDLNFRMFDVGGQRS

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

77.1

35.1

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

0.36

57.8

43.1

Minor 5ss

33.8

-1.8

54.5

49.7

Minor BPS

46.9

-0.2

2.1

60.13

44.7

Associated Gene:

Gene:

GNAT1

Ensembl Gene ID:

ENSAPLG00000004306

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010215

103151 - 105452

2302