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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_10580_10904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10580 - 10904

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCCTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAT

U12 Branch Point Sequence:

TTTGCCTTCAAG

Flanking Amino Acid:

RQTVLEALQQLIRVTQPELI

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

40.1

Major BPS

63.3

0.33

1.2

65.6

39.7

Major PPT

68.8

0.42

1.1

65.2

40.9

Minor 5ss

28.4

-2.5

3.5

47.6

Minor BPS

0.04

2.1

68.4

44.9

Associated Gene:

Gene:

SEMA3G

Ensembl Gene ID:

ENSAPLG00000012760

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022242

5871 - 29342

23472

ENSAPLT00000021381

5871 - 30507

24637