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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_117935_118199_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

117935 - 118199

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGCTCCCG

5'SS Class:

major

3'SS Sequence:

GCTCCCCAGCGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGGAC

U12 Branch Point Sequence:

CCTACCAGCACA

Flanking Amino Acid:

PQLPISLPSCRGRCRGLEMG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.2

46.6

43.2

Major BPS

49.6

-0

1.4

44.3

Major PPT

44.8

-0.3

1.7

43.2

37.8

Minor 5ss

21.4

-3.3

3.8

30.9

42.6

Minor BPS

42.7

-0.5

2.1

53.77

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029511

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021512

117870 - 118668

799