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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_120103_120189_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
120103 - 120189

Intron Length:
87

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGGACT

5'SS Class:
strong_major

3'SS Sequence:
TCTGCATTCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGCAT

U12 Branch Point Sequence:
CCCCTCTGCATT

Flanking Amino Acid:
AHLKQLLRMPCPIILDPADP

Intron Amino Acid Position:
287

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.9
0.8
0.9
77.9
36.3

Major BPS
62.4
0.31
1.4
73.6
41.8

Major PPT
75.4
0.57
0.9
69.2
35.8

Minor 5ss
35
-1.7
3.2
47
42.5

Minor BPS
43.1
-0.4
1.8
52.82
43

Associated Gene:

Gene:
OASL

Ensembl Gene ID:

Chromosome:
PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

119266 - 121939
2674

119266 - 121939
2674