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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_14119_14219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14119 - 14219

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGTAG

U12 Branch Point Sequence:

GCCTCGGTACCA

Flanking Amino Acid:

GLFTLLVEDFGVKGVQVEEI

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

43.1

-0.4

1.8

43.1

49.2

Major PPT

85.1

0.79

0.8

79.6

32.3

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

39.5

-0.8

2.6

50.93

46.8

Associated Gene:

Gene:

SEMA3G

Ensembl Gene ID:

ENSAPLG00000012760

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022242

5871 - 29342

23472

ENSAPLT00000021381

5871 - 30507

24637