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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_25212_26490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25212 - 26490

Intron Length:

1279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GCCCTCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAA

U12 Branch Point Sequence:

TCCCCCTTAGTG

Flanking Amino Acid:

ECFRKGKDPGTDCANYIRLL

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

46.4

-0.2

1.4

54.9

40.8

Major PPT

0.45

0.8

60.9

35.2

Minor 5ss

32.9

-2

36.4

40.6

Minor BPS

54.4

-0

1.7

56.41

45.4

Associated Gene:

Gene:

SEMA3G

Ensembl Gene ID:

ENSAPLG00000012760

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022242

5871 - 29342

23472

ENSAPLT00000021381

5871 - 30507

24637

ENSAPLT00000013300

19636 - 29342

9707