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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_26554_26724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26554 - 26724

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCAAAA

U12 Branch Point Sequence:

GTCCCCTCCACC

Flanking Amino Acid:

LDRASTDTKEIYWPPLPGQT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

47.3

-0.1

50.8

30.3

Major PPT

81.3

0.7

0.9

72.6

42.4

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

48.7

-0.1

61.1

43.9

Associated Gene:

Gene:

SEMA3G

Ensembl Gene ID:

ENSAPLG00000012760

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022242

5871 - 29342

23472

ENSAPLT00000021381

5871 - 30507

24637

ENSAPLT00000013300

19636 - 29342

9707