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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_46584_49783_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46584 - 49783

Intron Length:

3200

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGGATGGC

5'SS Class:

major

3'SS Sequence:

CATGGCGAGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGGCAT

U12 Branch Point Sequence:

TAGCCCTCAGCT

Flanking Amino Acid:

SSARLWLPPQGGPNTTDGLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

68.6

35.8

Major BPS

-0

1.5

60.7

45.9

Major PPT

49.4

-0

1.2

39.3

43.7

Minor 5ss

15.2

-4

3.7

25.2

37.3

Minor BPS

53.1

0.18

1.8

71.56

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028644

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042051

45510 - 49846

4337