Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_48029_48119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48029 - 48119

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGAACG

5'SS Class:

major

3'SS Sequence:

TCTTCTCGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

TCGGGGTTGATG

Flanking Amino Acid:

SVLACGRTEPDPAQDEEVLL

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

65.1

40.8

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

75.9

0.58

0.9

Minor 5ss

27.9

-2.5

2.7

24.8

36.2

Minor BPS

38.8

-1

2.4

40.9

44.7

Associated Gene:

Gene:

PARP3

Ensembl Gene ID:

ENSAPLG00000011915

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040277

45707 - 51533

5827

ENSAPLT00000012400

47859 - 51986

4128