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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_48608_48752_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
48608 - 48752

Intron Length:
145

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGAAGA

5'SS Class:
strong_major

3'SS Sequence:
CACGTCTCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTTAG

U12 Branch Point Sequence:
CAGCCCTTAGCT

Flanking Amino Acid:
NIWVVAREGEDKSFQAHDHL

Intron Amino Acid Position:
374

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.1
0.87
0.8
76.9
33.7

Major BPS
47
-0.1
1.5
42.9
40.1

Major PPT
71.7
0.49
0.9
61.7
39.7

Minor 5ss
27.4
-2.6
2.7
31.6
42.2

Minor BPS
59.6
0.38
1.7
70.81
45.6

Associated Gene:

Gene:
PARP3

Ensembl Gene ID:

Chromosome:
PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45707 - 51533
5827

47859 - 51986
4128