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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_49117_49229_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
49117 - 49229

Intron Length:
113

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGAGATGC

5'SS Class:
major

3'SS Sequence:
GTGTCCCTGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAGTGAG

U12 Branch Point Sequence:
TCCCCAGTGAGG

Flanking Amino Acid:
LLRAKKDMLLVLADIEVAQS

Intron Amino Acid Position:
297

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
0.9
64.7
36.1

Major BPS
44.9
-0.3
1.6
38.4
41.7

Major PPT
66.3
0.37
1.1
58.5
43

Minor 5ss
33
-1.9
3
38.6
41

Minor BPS
37.3
-1.1
2.3
40.66
43.8

Associated Gene:

Gene:
PARP3

Ensembl Gene ID:

Chromosome:
PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45707 - 51533
5827

47859 - 51986
4128