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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_49457_49647_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
49457 - 49647

Intron Length:
191

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAGGAGGT

5'SS Class:
major

3'SS Sequence:
TGCCCCTGTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGATGAC

U12 Branch Point Sequence:
GTGATGACAACC

Flanking Amino Acid:
FRDAMKTMNIDVKKMPLGKL

Intron Amino Acid Position:
221

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.1
61.1
43.9

Major BPS
59.6
0.24
1.2
51.4
43.9

Major PPT
65.7
0.35
0.9
57.7
38.5

Minor 5ss
31.2
-2.1
3.7
47.1
48.3

Minor BPS
38.5
-0.8
2.2
48.78
40.9

Associated Gene:

Gene:
PARP3

Ensembl Gene ID:

Chromosome:
PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45707 - 51533
5827

47859 - 51986
4128