Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_50369_50624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50369 - 50624

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCCCA

5'SS Class:

major

3'SS Sequence:

GTGTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAT

U12 Branch Point Sequence:

GTGCCCCTGACG

Flanking Amino Acid:

YSTWSRWGRVGEVGQSKLTP

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

60.3

40.2

Major BPS

0.42

1.4

71.4

45.1

Major PPT

72.5

0.51

65.8

40.9

Minor 5ss

32.9

-2

36.8

41.4

Minor BPS

50.9

-0.1

1.8

58.12

43.2

Associated Gene:

Gene:

PARP3

Ensembl Gene ID:

ENSAPLG00000011915

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040277

45707 - 51533

5827

ENSAPLT00000012400

47859 - 51986

4128