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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_53890_54210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53890 - 54210

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGGCTTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAT

U12 Branch Point Sequence:

CAGGGGCTAATT

Flanking Amino Acid:

YDSRDYDSPERERERRNSDK

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

61.6

0.29

1.3

63.6

42.5

Major PPT

69.5

0.44

41.2

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

35.9

-0.9

2.4

48.74

44.9

Associated Gene:

Gene:

RBM5

Ensembl Gene ID:

ENSAPLG00000011176

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011724

53286 - 68197

14912

ENSAPLT00000025980

53286 - 67945

14660