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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009624.1_54367_56406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54367 - 56406

Intron Length:

2040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

AAATCTCACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GAAACCTTAACT

Flanking Amino Acid:

GLPITVTENDIRELIESFEG

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

62.3

0.28

55.7

39.2

Minor 5ss

38.5

-1.3

2.8

50.4

39.2

Minor BPS

74.5

0.85

1.3

80.5

40.2

Associated Gene:

Gene:

RBM5

Ensembl Gene ID:

ENSAPLG00000011176

Chromosome:

PEDO01009624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011724

53286 - 68197

14912

ENSAPLT00000025980

53286 - 67945

14660